Otu, Hasan H: search on Z-Library

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1

Genomic Counter-Stress Changes Induced by the Relaxation Response

Dusek, Jeffery A., Otu, Hasan H., Wohlhueter, Ann L., Bhasin, Manoj, Zerbini, Luiz F., Joseph, Marie G., Benson, Herbert, Libermann, Towia A., Awadalla, Philip

Journal:

Year:

2008

Language:

english

File:

PDF, 822 KB

english, 2008

2

[IEEE 2009 International Joint Conference on Bioinformatics, Systems Biology and Intelligent Computing - Shanghai, China (2009.08.3-2009.08.5)] 2009 International Joint Conference on Bioinformatics, Systems Biology and Intelligent Computing - Prediction of Peptides Binding to MHC Class I Alleles by Partial Periodic Pattern Mining

Meydan, Cem, Otu, Hasan, Sezerman, Ugur

Year:

2009

Language:

english

File:

PDF, 997 KB

english, 2009

3

Reprogrammed Transcriptome in Rhesus-Bovine Interspecies Somatic Cell Nuclear Transfer Embryos

Wang, Kai, Otu, Hasan H., Chen, Ying, Lee, Young, Latham, Keith, Cibelli, Jose B., Wutz, Anton

Journal:

Year:

2011

Language:

english

File:

PDF, 1.83 MB

english, 2011

4

Tissue permeability associated with chemokine-class inflammatory response following cardiac surgery

Basel Ramlawi, Hasan Otu, Sirisha Emani, Cesario Bianchi, Frank W. Sellke

Journal:

Journal of the American College of Surgeons

Year:

2009

Language:

english

File:

PDF, 109 KB

english, 2009

5

Gene Expression of Purified β-Cell Tissue Obtained from Human Pancreas with Laser Capture Microdissection

Marselli, Lorella, Thorne, Jeffrey, Ahn, Yu-Bae, Omer, Abdulkadir, Sgroi, Dennis C., Libermann, Towia, Otu, Hasan H., Sharma, Arun, Bonner-Weir, Susan, Weir, Gordon C.

Journal:

Journal of Clinical Endocrinology & Metabolism

Year:

2008

Language:

english

File:

PDF, 323 KB

english, 2008

6

Noninvasive exosomal proteomic biosignatures, including cystatin SN, peroxiredoxin-5, and glycoprotein VI, accurately predict chronic rhinosinusitis with nasal polyps

Mueller, Sarina K., Nocera, Angela L., Dillon, Simon T., Gu, Xuesong, Wendler, Olaf, Otu, Hasan H., Libermann, Towia A., Bleier, Benjamin S.

Journal:

International Forum of Allergy & Rhinology

Year:

2018

Language:

english

File:

PDF, 991 KB

english, 2018

7

Identification of Plasma Proteome Signatures Associated With Surgery Using SOMAscan

Fong, Tamara G., Chan, Noel Y., Dillon, Simon T., Zhou, Wenxiao, Tripp, Bridget, Ngo, Long H., Otu, Hasan H., Inouye, Sharon K., Vasunilashorn, Sarinnapha M., Cooper, Zara, Xie, Zhongcong, Marcantonio

Journal:

Annals of Surgery

Year:

2019

File:

PDF, 936 KB

2019

8

Bioinformatics Approaches to Single-Cell Analysis in Developmental Biology

Yalcin, Dicle, Hakguder, Zeynep M., Otu, Hasan H.

Journal:

Molecular Human Reproduction

Year:

2015

Language:

english

File:

PDF, 469 KB

english, 2015

9

Testing robustness of relative complexity measure method constructing robust phylogenetic trees forGalanthusL. Using the relative complexity measure

Yasin Bakış, Hasan H Otu, Nivart Taşçı, Cem Meydan, Neş’e Bilgin…

Journal:

BMC Bioinformatics

Year:

2013

Language:

english

File:

PDF, 999 KB

english, 2013

10

Differential gene expression of bone marrow-derived CD34+ cells is associated with survival of patients suffering from myelodysplastic syndrome

Wolf C. Prall, Akos Czibere, Franck Grall, Dimitrios Spentzos, Ulrich Steidl, Aristoteles Achilles Nikolaus Giagounidis, Andrea Kuendgen, Hasan Otu, Astrid Rong, Towia A. Libermann, Ulrich Germing, No

Journal:

International Journal of Hematology

Year:

2009

Language:

english

File:

PDF, 457 KB

english, 2009

11

Placenta accreta spectrum: biomarker discovery using plasma proteomics

Shainker, Scott A., Silver, Robert M., Modest, Anna M., Hacker, Michele R., Hecht, Jonathan L., Salahuddin, Saira, Dillon, Simon T., Ciampa, Erin J., D'Alton, Mary E., Otu, Hasan H., Abuhamad, Alfred

Journal:

American Journal of Obstetrics and Gynecology

Year:

2020

File:

PDF, 2.40 MB

2020

12

Identification of a novel gene set in human cumulus cells predictive of an oocyte's pregnancy potential

Iager, Amy E., Kocabas, Arif M., Otu, Hasan H., Ruppel, Patricia, Langerveld, Anna, Schnarr, Patricia, Suarez, Mariluz, Jarrett, John C., Conaghan, Joe, Rosa, Guilherme J.M., Fernández, Emilio, Rawlin

Journal:

Fertility and Sterility

Year:

2013

Language:

english

File:

PDF, 471 KB

english, 2013

13

FQStat: a parallel architecture for very high-speed assessment of sequencing quality metrics

Chanumolu, Sree K., Albahrani, Mustafa, Otu, Hasan H.

Journal:

BMC Bioinformatics

Year:

2019

Language:

english

File:

PDF, 1.35 MB

english, 2019

14

Gene expression analysis of embryonic stem cells expressing VE-cadherin (CD144) during endothelial differentiation

Vesna Nikolova-Krstevski, Manoj Bhasin, Hasan H Otu, Towia Libermann, Peter Oettgen

Journal:

Year:

2008

Language:

english

File:

PDF, 1.38 MB

english, 2008

15

Gene expression profiling of granulosa cells from PCOS patients following varying doses of human chorionic gonadotropin

Serdar Coskun, Hasan H. Otu…

Journal:

Journal of Assisted Reproduction and Genetics

Year:

2013

Language:

english

File:

PDF, 476 KB

english, 2013

16

Bioinformatic identification and characterization of human endothelial cell-restricted genes

Manoj Bhasin, Lei Yuan, Derin B Keskin, Hasan H Otu, Towia A Libermann, Peter Oettgen

Journal:

Year:

2010

Language:

english

File:

PDF, 3.50 MB

english, 2010

17

Clustering of protein families into functional subtypes using Relative Complexity Measure with reduced amino acid alphabets

Aydin Albayrak, Hasan H Otu, Ugur O Sezerman

Journal:

BMC Bioinformatics

Year:

2010

Language:

english

File:

PDF, 632 KB

english, 2010

18

[IEEE 2012 7th International Symposium on Health Informatics and Bioinformatics (HIBIT) - Nevsehir, Turkey (2012.04.19-2012.04.22)] 2012 7th International Symposium on Health Informatics and Bioinformatics - Detecting gene interactions within a Bayesian Network framework using external knowledge

Isci, Senol, Agyuz, Umut, Ozturk, Cengizhan, Otu, Hasan H.

Year:

2012

Language:

english

File:

PDF, 340 KB

english, 2012

19

Prediction of peptides binding to MHC class I and II alleles by temporal motif mining

Cem Meydan, Hasan H Otu, Osman Uğur Sezerman

Journal:

BMC Bioinformatics

Year:

2013

Language:

english

File:

PDF, 621 KB

english, 2013

20

METABOLOMICS OF DELIRIUM: A CASE-CONTROL STUDY

Tripp, Bridget, Dillon, Simon, Vasunilashorn, Sarinnapha, Ngo, Long H, Fong, Tamara G, Marcantonio, Edward R, Libermann, Towia A, Otu, Hasan

Journal:

Innovation in Aging

Year:

2019

File:

PDF, 85 KB

2019

21

Gene Expression of Purified β-Cell Tissue Obtained from Human Pancreas with Laser Capture Microdissection

Marselli, Lorella, Thorne, Jeffrey, Ahn, Yu-Bae, Omer, Abdulkadir, Sgroi, Dennis C., Libermann, Towia, Otu, Hasan H., Sharma, Arun, Bonner-Weir, Susan, Weir, Gordon C.

Journal:

Journal of Clinical Endocrinology & Metabolism

Year:

2008

File:

PDF, 323 KB

2008

22

Development of a Dynamic Multi-Protein Signature of Postoperative Delirium

Vasunilashorn, Sarinnapha M, Ngo, Long H, Chan, Noel Y, Zhou, Wenxiao, Dillon, Simon T, Otu, Hasan H, Inouye, Sharon K, Wyrobnik, Iris, Kuchel, George A, McElhaney, Janet E, Xie, Zhongcong, Alsop, Dav

Journal:

The Journals of Gerontology Series A Biological Sciences and Medical Sciences

Year:

2018

Language:

english

File:

PDF, 985 KB

english, 2018

23

AN INFLAMMATORY SIGNATURE OF POSTOPERATIVE DELIRIUM

Vasunilashorn, Sarinnapha, Ngo, Long H, Dillon, Simon, Otu, Hasan, Tripp, Bridget, Inouye, Sharon, Libermann, Towia A, Marcantonio, Edward R

Journal:

Innovation in Aging

Year:

2019

File:

PDF, 108 KB

2019

24

Bayesian network based pathway analysis of microarray data

Senol Isci, Cengihan Ozturk, Jon Jones, Hasan Otu

Journal:

Current Opinion in Biotechnology

Year:

2011

Language:

english

File:

PDF, 86 KB

english, 2011

25

Grammar-based distance in progressive multiple sequence alignment

David J Russell, Hasan H Otu, Khalid Sayood

Journal:

BMC Bioinformatics

Year:

2008

Language:

english

File:

PDF, 384 KB

english, 2008

26

Translating transcription: proteomics in chronic rhinosinusitis with nasal polyps reveals significant discordance with messenger RNA expression

Workman, Alan D., Nocera, Angela L., Mueller, Sarina K., Otu, Hasan H., Libermann, Towia A., Bleier, Benjamin S.

Journal:

International Forum of Allergy & Rhinology

Year:

2019

File:

PDF, 933 KB

2019

27

INFLAMMATION AS A POTENTIAL SHARED MECHANISM FOR POSTOPERATIVE DELIRIUM AND LONG-TERM COGNITIVE DECLINE IN OLDER ADULTS UNDERGOING MAJOR SURGERY

Vasunilashorn, Sarinnapha M., Ngo, Long H., Dillon, Simon T., Otu, Hasan H., Tripp, Bridget A., Fong, Tamara G., Arnold, Steven E., Xie, Zhongcong, Inouye, Sharon K., Libermann, Towia A., Marcantonio,

Journal:

Alzheimer's & Dementia

Year:

2019

File:

PDF, 99 KB

2019

28

Higher C-Reactive Protein Levels Predict Postoperative Delirium in Older Patients Undergoing Major Elective Surgery: A Longitudinal Nested Case-Control Study

Dillon, Simon T., Vasunilashorn, Sarinnapha M., Ngo, Long, Otu, Hasan H., Inouye, Sharon K., Jones, Richard N., Alsop, David C., Kuchel, George A., Metzger, Eran D., Arnold, Steven E., Marcantonio, Ed

Journal:

Biological Psychiatry

Year:

2016

Language:

english

File:

PDF, 1003 KB

english, 2016

29

Whole Genome Sequence of a Turkish Individual

Dogan, Haluk, Can, Handan, Otu, Hasan H., Zhang, Huiping

Journal:

Year:

2014

Language:

english

File:

PDF, 1.21 MB

english, 2014

30

Utilization of the relative complexity measure to construct a phylogenetic tree for fungi

Dhundy R. Bastola, Hasan H. Otu, Sarah E. Doukas, Khalid Sayood, Steven H. Hinrichs, Peter C. Iwen

Journal:

Mycological Research

Year:

2004

Language:

english

File:

PDF, 217 KB

english, 2004

31

Unexpected effects of systemic steroids on the CRSwNP proteome: is protein upregulation more important than inhibition?

Workman, Alan D., Miyake, Michelle M., Nocera, Angela L., Mueller, Sarina K., Finn, Kristen, Otu, Hasan H., Libermann, Towia A., Bleier, Benjamin S.

Journal:

International Forum of Allergy & Rhinology

Year:

2020

File:

PDF, 1.18 MB

2020

32

Cdc42-Dependent Transfer of mir301 from Breast Cancer-Derived Extracellular Vesicles Regulates the Matrix Modulating Ability of Astrocytes at the BloodâBrain Barrier

Morad, Golnaz, Daisy, Cassandra C., Otu, Hasan H., Libermann, Towia A., Dillon, Simon T., Moses, Marsha A.

Journal:

International Journal of Molecular Sciences

Year:

2020

File:

PDF, 1.63 MB

2020

33

Parenteral lipid emulsions induce unique ileal fatty acid and metabolomic profiles but do not increase the risk of necrotizing enterocolitis in preterm pigs

Yakah, William, Singh, Pratibha, Brown, Joanne, Stoll, Barbara, Burrin, Douglas G., Premkumar, Muralidhar H., Otu, Hasan H., Gu, Xuesong, Dillon, Simon T., Liberman, Towia A, Freedman, Steven D, Marti

Journal:

American Journal of Physiology - Gastrointestinal and Liver Physiology

Year:

2020

File:

PDF, 6.99 MB

2020

34

Essential role of Jun family transcription factors in PU.1 knockdown–induced leukemic stem cells

Steidl, Ulrich, Rosenbauer, Frank, Verhaak, Roel G W, Gu, Xuesong, Ebralidze, Alexander, Otu, Hasan H, Klippel, Steffen, Steidl, Christian, Bruns, Ingmar, Costa, Daniel B

Journal:

Nature Genetics

Year:

2006

Language:

english

File:

PDF, 425 KB

english, 2006

35

Proteomic Analysis of the Allograft Response

El Essawy, Basset, Otu, Hasan H., Choy, Bob, Zheng, Xin Xiao, Libermann, Towia A., Strom, Terry B.

Journal:

Transplantation Journal

Year:

2006

Language:

english

File:

PDF, 2.18 MB

english, 2006

36

Differential expression of GADD45β in normal and osteoarthritic cartilage: Potential role in homeostasis of articular chondrocytes

Kosei Ijiri, Luiz F. Zerbini, Haibing Peng, Hasan H. Otu, Kaneyuki Tsuchimochi, Miguel Otero, Cecilia Dragomir, Nicole Walsh, Benjamin E. Bierbaum, David Mattingly, Geoff van Flandern, Setsuro Komiya,

Journal:

Arthritis & Rheumatism

Year:

2008

Language:

english

File:

PDF, 1.23 MB

english, 2008

37

Gene expression profile of mouse prostate tumors reveals dysregulations in major biological processes and identifies potential murine targets for preclinical development of human prostate cancer therapy

Kerstyn M. Haram, Heidi J. Peltier, Bin Lu, Manoj Bhasin, Hasan H. Otu, Bob Choy, Meredith Regan, Towia A. Libermann, Gary J. Latham, Martin G. Sanda, Mohamed S. Arredouani

Journal:

Year:

2008

Language:

english

File:

PDF, 353 KB

english, 2008

38

Aprotinin Attenuates Genomic Expression Variability Following Cardiac Surgery

Basel Ramlawi, Hasan Otu, Mark J. Russo, Richard J. Novick, Cesario Bianchi, Frank W. Sellke

Journal:

Journal of Cardiac Surgery

Year:

2009

Language:

english

File:

PDF, 173 KB

english, 2009

39

Optimization and evaluation of surface-enhanced laser desorption/ionization time-of-flight mass spectrometry (SELDI-TOF MS) with reversed-phase protein arrays for protein profiling

Aivado, Manuel, Spentzos, Dimitrios, Alterovitz, Gil, Otu, Hasan H., Grall, Franck, Giagounidis, Aristoteles A. N., Wells, Meghan, Cho, Je-Yoel, Germing, Ulrich, Czibere, Akos, Prall, Wolf C., Porter,

Journal:

Clinical Chemistry and Laboratory Medicine

Year:

2005

Language:

english

File:

PDF, 216 KB

english, 2005

40

[IEEE 2017 IEEE International Conference on Electro Information Technology (EIT) - Lincoln, NE, USA (2017.5.14-2017.5.17)] 2017 IEEE International Conference on Electro Information Technology (EIT) - Comparative analysis of human and mouse CpG islands using dbCGI

Yalcin, Dicle, Otu, Hasan H.

Year:

2017

Language:

english

File:

PDF, 745 KB

english, 2017

41

Oxidative Stress and Atrial Fibrillation After Cardiac Surgery: A Case-Control Study

Basel Ramlawi, Hasan Otu, Shigetoshi Mieno, Munir Boodhwani, Neel R. Sodha, Richard T. Clements, Cesario Bianchi, Frank W. Sellke

Journal:

The Annals of Thoracic Surgery

Year:

2007

Language:

english

File:

PDF, 270 KB

english, 2007

42

Translating transcription: proteomics in chronic rhinosinusitis with nasal polyps reveals significant discordance with messenger RNA expression

Workman, Alan D., Nocera, Angela L., Mueller, Sarina K., Otu, Hasan H., Libermann, Towia A., Bleier, Benjamin S.

Journal:

International Forum of Allergy & Rhinology

Year:

2019

Language:

english

File:

PDF, 933 KB

english, 2019

43

Proteomic Identification of Interleukin-2 Therapy Response in Metastatic Renal Cell Cancer

Jones, Jon, Otu, Hasan H., Grall, Franck, Spentzos, Dimitrios, Can, Handan, Aivado, Manuel, Belldegrun, Arie S., Pantuck, Allan J., Libermann, Towia A.

Journal:

The Journal of Urology

Year:

2008

Language:

english

File:

PDF, 838 KB

english, 2008

44

Neutrophil activation in systemic capillary leak syndrome (Clarkson disease)

Xie, Zhihui, Kuhns, Douglas B., Gu, Xuesong, Otu, Hasan H., Libermann, Towia A., Gallin, John I., Parikh, Samir M., Druey, Kirk M.

Journal:

Journal of Cellular and Molecular Medicine

Year:

2019

Language:

english

File:

PDF, 1.08 MB

english, 2019

45

Su1911 – Identification of Serum Protein Biomarkers for Non-Invasive Diagnosis of Pediatric IBD Using Somascan

Dillon, Simon T., Otu, Hasan H., Morhardt, Tina L., Gu, Xuesong, Li, Emma, Kaplan, Jess, Moran, Christopher J., Winter, Harland, Libermann, Towia A.

Journal:

Gastroenterology

Year:

2019

Language:

english

File:

PDF, 973 KB

english, 2019

46

[IEEE 2013 8th International Symposium on Health Informatics and Bioinformatics (HIBIT) - Ankara, Turkey (2013.09.25-2013.09.27)] 2013 8th International Symposium on Health Informatics and Bioinformatics - A dynamic Bayesian framwork to learn temporal gene interactions using external knowledge

Agyuz, Umut, Isci, Senol, Ozturk, Cengizhan, Ademoglu, Ahmet, Otu, Hasan H.

Year:

2013

Language:

english

File:

PDF, 927 KB

english, 2013

47

[IEEE 2010 5th International Symposium on Health Informatics and Bioinformatics - Ankara, Turkey (2010.04.20-2010.04.22)] 2010 5th International Symposium on Health Informatics and Bioinformatics - Physico-chemical properties of DNA in phylogeny construction

Bakis, Yasin, Sezerman, O. Ugur, Otu, Hasan H.

Year:

2010

Language:

english

File:

PDF, 340 KB

english, 2010

48

Genomic expression pathways associated with brain injury after cardiopulmonary bypass

Basel Ramlawi, Hasan Otu, James L. Rudolph, Shigetoshi Mieno, Isaac S. Kohane, Handan Can, Towia A. Libermann, Edward R. Marcantonio, Cesario Bianchi, Frank W. Sellke

Journal:

The Journal of Thoracic and Cardiovascular Surgery

Year:

2007

Language:

english

File:

PDF, 2.12 MB

english, 2007

49

Distinct and Shared Determinants of Cardiomyocyte Contractility in Multi-Lineage Competent Ethnically Diverse Human iPSCs

Tomov, Martin L., Olmsted, Zachary T., Dogan, Haluk, Gongorurler, Eda, Tsompana, Maria, Otu, Hasan H., Buck, Michael, Chang, Eun-Ah, Cibelli, Jose, Paluh, Janet L.

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 4.15 MB

english, 2016

50

PROTEOMIC IDENTIFICATION AND VALIDATION OF INTERLEUKIN-2 THERAPY RESPONSE IN METASTATIC RENAL CELL CANCER

Jones, Jon, Otu, Hasan H, Spentzos, Dimitrios, Belldegrun, Arie S, Libermann, Towia A, Pantuck, Allan J

Journal:

The Journal of Urology

Year:

2008

Language:

english

File:

PDF, 147 KB

english, 2008

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